1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.005G027000

Potri.005G027000


Description : Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase


Gene families : OG_42_0000491 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G027000
Cluster HCCA clusters: cluster_0044

Target Alias Description ECC score Gene Family Method Actions
A4A49_00168 No alias lysine-specific demethylase jmj25 0.03 Orthogroups_2024-Update
At4g00990 No alias Transcription factor jumonji (JmjC) domain-containing... 0.03 Orthogroups_2024-Update
Bradi3g01060 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.02 Orthogroups_2024-Update
Glyma.20G104900 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.03 Orthogroups_2024-Update
Pp1s430_29V6 No alias transcription factor jumonjidomain-containing protein 0.02 Orthogroups_2024-Update
Sobic.004G355200.1 No alias histone demethylase *(KDM3) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR014977 WRC_dom 19 59
IPR003347 JmjC_dom 788 879
IPR018866 Znf-4CXXC_R1 193 259
No external refs found!