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  5. Sopen12g004880

Sopen12g004880


Description : Ion transport protein


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g004880
Cluster HCCA clusters: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
A4A49_19266 No alias putative cyclic nucleotide-gated ion channel 8 0.02 Orthogroups_2024-Update
At2g46440 No alias Cyclic nucleotide-gated ion channel 11... 0.03 Orthogroups_2024-Update
At3g17690 No alias Putative cyclic nucleotide-gated ion channel 19... 0.02 Orthogroups_2024-Update
Bradi3g57510 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Glyma.06G271200 No alias cyclic nucleotide-gated cation channel 4 0.03 Orthogroups_2024-Update
Glyma.16G025400 No alias cyclic nucleotide-gated channel 13 0.01 Orthogroups_2024-Update
Glyma.16G218000 No alias cyclic nucleotide-binding transporter 1 0.04 Orthogroups_2024-Update
Glyma.19G255300 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
PSME_00005940-RA No alias (at5g15410 : 820.0) 'defense, no death' gene (DND1)... 0.02 Orthogroups_2024-Update
PSME_00010744-RA No alias (at3g17700 : 191.0) cyclic nucleotide-binding... 0.04 Orthogroups_2024-Update
PSME_00032968-RA No alias (at1g19780 : 461.0) member of Cyclic nucleotide gated... 0.02 Orthogroups_2024-Update
Potri.015G019100 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
Seita.4G168400.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Seita.9G085500.1 No alias temperature sensor protein *(CNGC2) & cyclic... 0.02 Orthogroups_2024-Update
Solyc03g007250 No alias Cyclic nucleotide gated channel CNGC6 (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc03g007260 No alias Cyclic nucleotide gated channel CNGC6 (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc05g050380 No alias Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) 0.04 Orthogroups_2024-Update
Solyc12g010010 No alias Cyclic nucleotide-gated ion channel, putative (AHRD V3.3... 0.07 Orthogroups_2024-Update
evm.model.tig00021244.33 No alias (at4g30560 : 102.0) member of Cyclic nucleotide gated... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 66 390
IPR000595 cNMP-bd_dom 487 574
No external refs found!