Sopen12g005040

Description : Helix-loop-helix DNA-binding domain

Gene families : OG_42_0000630 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000630_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen12g005040
Cluster	HCCA clusters: Cluster_258

Target	Alias	Description	ECC score	Gene Family Method
425336	No alias	LJRHL1-like 3	0.02	Orthogroups_2024-Update
Potri.013G041000	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Sobic.001G056300.1	No alias	bHLH-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G065500.1	No alias	bHLH-type transcription factor	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	195	240

External Links

No external refs found!