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  5. Potri.005G046000

Potri.005G046000


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000374 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G046000
Cluster HCCA clusters: cluster_0097

Target Alias Description ECC score Gene Family Method Actions
Brara.H02642.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.09G174800 No alias ATP binding;nucleic acid binding;helicases 0.03 Orthogroups_2024-Update
Solyc06g007740 No alias Pentatricopeptide repeat protein (AHRD V3.3 *** A0A1B3IPW0_CAPAN) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 438 470
IPR002885 Pentatricopeptide_repeat 262 295
IPR002885 Pentatricopeptide_repeat 158 190
IPR002885 Pentatricopeptide_repeat 301 349
IPR002885 Pentatricopeptide_repeat 477 525
IPR002885 Pentatricopeptide_repeat 546 595
IPR002885 Pentatricopeptide_repeat 196 245
IPR002885 Pentatricopeptide_repeat 371 420
IPR002885 Pentatricopeptide_repeat 616 665
No external refs found!