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  5. Potri.005G062400

Potri.005G062400


Description : RING/U-box superfamily protein


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G062400
Cluster HCCA clusters: cluster_0185

Target Alias Description ECC score Gene Family Method Actions
A4A49_41488 No alias e3 ubiquitin-protein ligase rduf1 0.03 Orthogroups_2024-Update
At1g74620 No alias Putative RING zinc finger protein; 84572-85321... 0.02 Orthogroups_2024-Update
At3g13228 No alias RING/U-box superfamily protein... 0.03 Orthogroups_2024-Update
At3g30460 No alias RING/U-box superfamily protein... 0.04 Orthogroups_2024-Update
At3g60080 No alias At3g60080 [Source:UniProtKB/TrEMBL;Acc:Q9M1D5] 0.03 Orthogroups_2024-Update
Bradi3g37800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.G00930.1 No alias E3 ubiquitin ligase *(SNIPER) 0.03 Orthogroups_2024-Update
Brara.G02768.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.I03147.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Cre10.g422050 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G164358 No alias RING-H2 finger C1A 0.03 Orthogroups_2024-Update
Glyma.20G102400 No alias COP1-interacting protein 8 0.03 Orthogroups_2024-Update
HORVU0Hr1G002870.3 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g49550 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g43740 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g04680 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_219769g0010 No alias (at5g20910 : 155.0) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_79051g0010 No alias (at3g19950 : 171.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Mp7g04520.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
PSME_00041932-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.019G086500 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Seita.2G181600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.8G172700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G172800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G165900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g012080 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen03g029300 No alias Ring finger domain 0.04 Orthogroups_2024-Update
Sopen05g003750 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 179 221
No external refs found!