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  5. Potri.005G064500

Potri.005G064500


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G064500
Cluster HCCA clusters: cluster_0179

Target Alias Description ECC score Gene Family Method Actions
A4A49_18000 No alias putative pectate lyase 10 0.03 Orthogroups_2024-Update
Brara.C00647.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.04 Orthogroups_2024-Update
Brara.F03207.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
MA_10205415g0010 No alias (at5g63180 : 429.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
MA_10428603g0020 No alias (at1g67750 : 571.0) Pectate lyase family protein;... 0.03 Orthogroups_2024-Update
MA_10430145g0020 No alias (at5g48900 : 488.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Potri.011G008000 No alias root hair specific 14 0.03 Orthogroups_2024-Update
Potri.015G064700 No alias Pectate lyase family protein 0.03 Orthogroups_2024-Update
Solyc09g061890 No alias Pectate lyase (AHRD V3.3 *** M1BAL5_SOLTU) 0.03 Orthogroups_2024-Update
Sopen02g025600 No alias Pectate lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002022 Pec_lyase 34 212
No external refs found!