Sopen12g005320


Description : Ring finger domain


Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g005320
Cluster HCCA clusters: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Bradi2g50940 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.C02146.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
Seita.7G053100.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
Solyc01g109340 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G23780.3) 0.03 Orthogroups_2024-Update
Sopen10g004240 No alias Zinc finger, C3HC4 type (RING finger) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 44 92
No external refs found!