Sopen12g005500

Description : AP2 domain

Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen12g005500
Cluster	HCCA clusters: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
A4A49_00099	No alias	floral homeotic protein apetala 2	0.03	Orthogroups_2024-Update
At1g79700	No alias	Integrase-type DNA-binding superfamily protein...	0.03	Orthogroups_2024-Update
At2g39250	No alias	AP2-like ethylene-responsive transcription factor SNZ...	0.03	Orthogroups_2024-Update
Kfl00326_0080	kfl00326_0080_v1.1	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
Kfl00657_0020	kfl00657_0020_v1....	(at5g57390 : 275.0) Encodes a member of the AP2 family...	0.03	Orthogroups_2024-Update
LOC_Os06g05340	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_121578g0010	No alias	(at4g37750 : 394.0) ANT is required for control of cell...	0.03	Orthogroups_2024-Update
PSME_00039531-RA	No alias	(at4g37750 : 368.0) ANT is required for control of cell...	0.03	Orthogroups_2024-Update
Potri.006G179900	No alias	ARIA-interacting double AP2 domain protein	0.03	Orthogroups_2024-Update
Potri.007G007400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.007G046200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s131_139V6	No alias	ap2 domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.5G356300.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.04	Orthogroups_2024-Update
Sopen06g025830	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen08g024960	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	77	128

External Links

No external refs found!