Description : Regulation of nuclear pre-mRNA domain-containing 1B (AHRD V3.3 *** A0A0B0P6N1_GOSAR)
Gene families : OG_42_0001250 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001250_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc02g094360 | |
Cluster | HCCA clusters: Cluster_132 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At5g65180 | No alias | ENTH/VHS family protein [Source:UniProtKB/TrEMBL;Acc:Q9FJP7] | 0.03 | Orthogroups_2024-Update | |
Glyma.18G019800 | No alias | ENTH/VHS family protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os11g03570 | No alias | protein of unknown function, DUF618 domain containing... | 0.02 | Orthogroups_2024-Update | |
MA_12916g0020 | No alias | (at5g65180 : 297.0) ENTH/VHS family protein; FUNCTIONS... | 0.03 | Orthogroups_2024-Update | |
Seita.9G076700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sopen11g007480 | No alias | RNA polymerase II-binding domain. | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Predicted GO |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Predicted GO |
MF | GO:0003909 | DNA ligase activity | IEP | Predicted GO |
MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Predicted GO |
MF | GO:0004435 | phosphatidylinositol phospholipase C activity | IEP | Predicted GO |
MF | GO:0004602 | glutathione peroxidase activity | IEP | Predicted GO |
MF | GO:0004620 | phospholipase activity | IEP | Predicted GO |
MF | GO:0004629 | phospholipase C activity | IEP | Predicted GO |
MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Predicted GO |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006281 | DNA repair | IEP | Predicted GO |
BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
MF | GO:0008565 | protein transporter activity | IEP | Predicted GO |
BP | GO:0016197 | endosomal transport | IEP | Predicted GO |
MF | GO:0016298 | lipase activity | IEP | Predicted GO |
BP | GO:0016458 | gene silencing | IEP | Predicted GO |
BP | GO:0016482 | cytosolic transport | IEP | Predicted GO |
MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Predicted GO |
MF | GO:0017048 | Rho GTPase binding | IEP | Predicted GO |
CC | GO:0030904 | retromer complex | IEP | Predicted GO |
BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
CC | GO:0098797 | plasma membrane protein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006903 | RNA_pol_II-bd | 64 | 125 |
No external refs found! |