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  5. Potri.005G109800

Potri.005G109800


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0009450 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G109800
Cluster HCCA clusters: cluster_0002

Target Alias Description ECC score Gene Family Method Actions
At3g51320 No alias Pentatricopeptide repeat-containing protein At3g51320... 0.03 Orthogroups_2024-Update
Seita.9G418600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G273900.2 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 214 244
IPR002885 Pentatricopeptide_repeat 115 143
IPR002885 Pentatricopeptide_repeat 347 373
IPR002885 Pentatricopeptide_repeat 245 274
IPR002885 Pentatricopeptide_repeat 186 211
IPR002885 Pentatricopeptide_repeat 388 414
IPR002885 Pentatricopeptide_repeat 318 344
No external refs found!