Potri.005G109900


Description : E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein


Gene families : OG_42_0000356 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G109900
Cluster HCCA clusters: cluster_0126

Target Alias Description ECC score Gene Family Method Actions
At5g42190 No alias SKP1-like protein 1B [Source:UniProtKB/Swiss-Prot;Acc:Q9FHW7] 0.02 Orthogroups_2024-Update
Cre12.g501200 No alias E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein 0.01 Orthogroups_2024-Update
GRMZM2G060394 No alias SKP1-like 4 0.02 Orthogroups_2024-Update
Kfl00055_0100 kfl00055_0100_v1.1 (at5g42190 : 233.0) Similar to SKP1 in yeast and humans... 0.02 Orthogroups_2024-Update
Mp5g10050.2 No alias target protein binding component SKP1/ASK1 of... 0.03 Orthogroups_2024-Update
Seita.8G115900.1 No alias ASK-type linker component of SCF E3 ubiquitin ligase complexes 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 109 156
IPR016073 Skp1_comp_POZ 6 64
No external refs found!