Sopen12g005850

Description : Ras family

Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen12g005850
Cluster	HCCA clusters: Cluster_394

Target	Alias	Description	ECC score	Gene Family Method
At4g18430	No alias	Ras-related protein RABA1e...	0.03	Orthogroups_2024-Update
Brara.F01791.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
Brara.H01978.1	No alias	A-class RAB GTPase	0.04	Orthogroups_2024-Update
Brara.J00514.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
GRMZM2G093186	No alias	RAB GTPase homolog A2B	0.02	Orthogroups_2024-Update
GRMZM2G473906	No alias	RAB GTPase homolog A2B	0.02	Orthogroups_2024-Update
Glyma.13G269000	No alias	RAB GTPase homolog A1B	0.03	Orthogroups_2024-Update
Glyma.13G289300	No alias	Ras-related small GTP-binding family protein	0.02	Orthogroups_2024-Update
Glyma.13G293200	No alias	RAB GTPase homolog A1F	0.03	Orthogroups_2024-Update
Potri.011G070300	No alias	RAB GTPase homolog A1C	0.02	Orthogroups_2024-Update
Potri.014G102200	No alias	RAB GTPase homolog A3	0.03	Orthogroups_2024-Update
Seita.3G178100.1	No alias	A-class RAB GTPase	0.04	Orthogroups_2024-Update
Seita.4G179100.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
Seita.9G248600.1	No alias	A-class RAB GTPase	0.03	Orthogroups_2024-Update
Sobic.001G017400.1	No alias	A-class RAB GTPase	0.02	Orthogroups_2024-Update
Solyc01g086850	No alias	Ras-related protein RGP1 (AHRD V3.3 *** RLGP1_ORYSJ)	0.04	Orthogroups_2024-Update
Solyc06g076450	No alias	Ras-related protein, expressed (AHRD V3.3 *** D8L9F8_WHEAT)	0.03	Orthogroups_2024-Update
Solyc10g008840	No alias	Rab family GTPase (AHRD V3.3 *** D8RE14_SELML)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	16	176

External Links

No external refs found!