Potri.005G125500

Description : U2 snRNP auxilliary factor, large subunit, splicing factor

Gene families : OG_42_0001657 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001657_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.005G125500
Cluster	HCCA clusters: cluster_0130

Target	Alias	Description	ECC score	Gene Family Method
Kfl00054_0160	kfl00054_0160_v1.1	(at1g60900 : 445.0) U2 snRNP auxilliary factor, large...	0.02	Orthogroups_2024-Update
Pp1s58_254V6	No alias	splicing factor-like protein	0.02	Orthogroups_2024-Update
Pp1s88_42V6	No alias	u2 snrnp auxiliary large subunit	0.02	Orthogroups_2024-Update
evm.model.contig_649.2	No alias	(at1g60900 : 243.0) U2 snRNP auxilliary factor, large...	0.02	Orthogroups_2024-Update
evm.model.tig00021464.4	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	363	432

External Links

No external refs found!