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  5. Sopen12g005920

Sopen12g005920


Description : TCP family transcription factor


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g005920
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
A4A49_18009 No alias transcription factor tcp4 0.03 Orthogroups_2024-Update
At1g53230 No alias TCP3 [Source:UniProtKB/TrEMBL;Acc:A0A178WDV9] 0.03 Orthogroups_2024-Update
At3g15030 No alias TCP4 [Source:UniProtKB/TrEMBL;Acc:A0A178VD44] 0.02 Orthogroups_2024-Update
At4g18390 No alias Transcription factor TCP2... 0.03 Orthogroups_2024-Update
Bradi1g58450 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0.02 Orthogroups_2024-Update
Bradi2g06890 No alias TCP family transcription factor 4 0.02 Orthogroups_2024-Update
Brara.K00447.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G110242 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update
Glyma.08G247300 No alias plastid transcription factor 1 0.02 Orthogroups_2024-Update
Glyma.12G158900 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 0.03 Orthogroups_2024-Update
Glyma.12G208800 No alias TCP family transcription factor 4 0.02 Orthogroups_2024-Update
Glyma.13G292500 No alias TCP family transcription factor 4 0.02 Orthogroups_2024-Update
Glyma.18G280700 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
Glyma.19G030900 No alias plastid transcription factor 1 0.03 Orthogroups_2024-Update
HORVU3Hr1G028240.5 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G073830.1 No alias TCP-type transcription factor 0.01 Orthogroups_2024-Update
LOC_Os12g42190 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
MA_4774g0010 No alias (at3g02150 : 116.0) a chloroplast trans-acting factor of... 0.02 Orthogroups_2024-Update
MA_547683g0010 No alias "(at4g18390 : 117.0) ""TEOSINTE BRANCHED 1, cycloidea... 0.02 Orthogroups_2024-Update
Mp1g19590.1 No alias transcription factor (TCP) 0.02 Orthogroups_2024-Update
Potri.001G375800 No alias TCP family transcription factor 4 0.02 Orthogroups_2024-Update
Potri.011G083100 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0.05 Orthogroups_2024-Update
Potri.013G119400 No alias TCP family transcription factor 4 0.03 Orthogroups_2024-Update
Potri.T152500 No alias Function unknown 0.02 Orthogroups_2024-Update
Seita.3G181900.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Seita.3G391900.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
Solyc02g077250 No alias LOW QUALITY:TCP transcription factor 1 0.04 Orthogroups_2024-Update
Solyc08g048390 No alias TCP transcription factor 24 0.04 Orthogroups_2024-Update
Solyc12g014140 No alias SlTCP3 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 61 181
No external refs found!