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  5. Potri.005G128800

Potri.005G128800


Description : LIM domain-containing protein


Gene families : OG_42_0000650 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G128800
Cluster HCCA clusters: cluster_0058

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14360 No alias LIM domain-containing protein 0.02 Orthogroups_2024-Update
MA_882912g0010 No alias (at4g36860 : 258.0) LIM domain-containing protein;... 0.03 Orthogroups_2024-Update
Pp1s38_163V6 No alias zinc ion binding 0.02 Orthogroups_2024-Update
Seita.9G164800.1 No alias ubiquitin-dependent protease *(DA1) 0.03 Orthogroups_2024-Update
Sobic.001G162500.2 No alias ubiquitin-dependent protease *(DA1) 0.02 Orthogroups_2024-Update
Solyc01g105210 No alias No description available 0.01 Orthogroups_2024-Update
Solyc02g089930 No alias Protein DA1-related 1 (AHRD V3.3 *** A0A199UXH9_ANACO) 0.03 Orthogroups_2024-Update
Sopen02g034620 No alias Protein of unknown function (DUF3633) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001781 Znf_LIM 132 186
IPR022087 DA1-like 281 495
No external refs found!