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  5. Potri.005G131800

Potri.005G131800


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0003994 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003994_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G131800
Cluster HCCA clusters: cluster_0002

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G208750 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G120630.5 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00037569-RA No alias (at2g13600 : 504.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
Sobic.010G134600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g090240 No alias Pentatricopeptide repeat-containing protein, putative... 0.03 Orthogroups_2024-Update
Solyc03g007350 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.06 Orthogroups_2024-Update
Sopen02g034930 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen03g003310 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 123 171
IPR002885 Pentatricopeptide_repeat 22 70
IPR002885 Pentatricopeptide_repeat 427 475
IPR002885 Pentatricopeptide_repeat 227 252
IPR002885 Pentatricopeptide_repeat 329 358
IPR002885 Pentatricopeptide_repeat 501 522
IPR002885 Pentatricopeptide_repeat 401 423
IPR002885 Pentatricopeptide_repeat 301 327
IPR002885 Pentatricopeptide_repeat 199 222
No external refs found!