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  5. Potri.005G150501

Potri.005G150501


Description : AGAMOUS-like 16


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G150501
Cluster HCCA clusters: cluster_0043

Target Alias Description ECC score Gene Family Method Actions
A4A49_09228 No alias mads-box protein jointless 0.03 Orthogroups_2024-Update
A4A49_14235 No alias developmental protein sepallata 1 0.04 Orthogroups_2024-Update
A4A49_18989 No alias agamous-like mads-box protein agl19 0.03 Orthogroups_2024-Update
A4A49_29655 No alias floral homeotic protein globosa 0.07 Orthogroups_2024-Update
At1g69120 No alias AP1 [Source:UniProtKB/TrEMBL;Acc:A0A178W846] 0.03 Orthogroups_2024-Update
At4g11880 No alias Agamous-like MADS-box protein AGL14... 0.04 Orthogroups_2024-Update
At5g51860 No alias MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5] 0.03 Orthogroups_2024-Update
Bradi3g32090 No alias AGAMOUS-like 20 0.02 Orthogroups_2024-Update
Bradi3g41297 No alias AGAMOUS-like 14 0.02 Orthogroups_2024-Update
Brara.B03794.1 No alias MADS/AGL-type transcription factor 0.04 Orthogroups_2024-Update
Brara.I03965.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00198.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G133568 No alias AGAMOUS-like 16 0.04 Orthogroups_2024-Update
Glyma.01G020500 No alias AGAMOUS-like 21 0.03 Orthogroups_2024-Update
Glyma.11G252300 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.15G088600 No alias K-box region and MADS-box transcription factor family protein 0.06 Orthogroups_2024-Update
HORVU6Hr1G002270.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Potri.010G154100 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Pp1s267_56V6 No alias agamous-like protein 0.02 Orthogroups_2024-Update
Solyc01g093960 No alias MADS-box transcription factor (AHRD V3.3 *** A0A072TNM9_MEDTR) 0.03 Orthogroups_2024-Update
Sopen01g037750 No alias K-box region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002487 TF_Kbox 84 169
IPR002100 TF_MADSbox 10 57
No external refs found!