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  5. Sopen12g006560

Sopen12g006560


Description : WRKY DNA -binding domain


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g006560
Cluster HCCA clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
A4A49_16192 No alias putative wrky transcription factor 29 0.03 Orthogroups_2024-Update
Bradi2g48090 No alias WRKY DNA-binding protein 51 0.02 Orthogroups_2024-Update
Bradi5g13090 No alias WRKY DNA-binding protein 2 0.02 Orthogroups_2024-Update
Glyma.03G042700 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
Glyma.03G109100 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G020140.3 No alias WRKY-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os01g51690 No alias WRKY26, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g58420 No alias WRKY6, expressed 0.02 Orthogroups_2024-Update
MA_175750g0010 No alias (at1g62300 : 137.0) Encodes a transcription factor... 0.03 Orthogroups_2024-Update
PSME_00021156-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00037996-RA No alias (at5g43290 : 110.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
Seita.3G054500.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Seita.9G305800.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G381300.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G037500.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G092100.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Solyc01g104550 No alias WRKY transcription factor 9 0.02 Orthogroups_2024-Update
Solyc08g081630 No alias WRKY transcription factor 56 0.03 Orthogroups_2024-Update
Solyc10g005680 No alias WRKY transcription factor 15 0.03 Orthogroups_2024-Update
Sopen06g021620 No alias WRKY DNA -binding domain 0.03 Orthogroups_2024-Update
Sopen10g005700 No alias WRKY DNA -binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003657 WRKY_dom 190 246
No external refs found!