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  5. Potri.005G189800

Potri.005G189800


Description : plant U-box 29


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G189800
Cluster HCCA clusters: cluster_0066

Target Alias Description ECC score Gene Family Method Actions
Bradi5g09720 No alias plant U-box 22 0.03 Orthogroups_2024-Update
Brara.A02878.1 No alias U-Box-group-III E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C03388.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.C04418.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G151204 No alias CYS, MET, PRO, and GLY protein 1 0.02 Orthogroups_2024-Update
GRMZM2G168980 No alias plant U-box 23 0.03 Orthogroups_2024-Update
GRMZM5G855994 No alias ARM repeat superfamily protein 0.05 Orthogroups_2024-Update
HORVU6Hr1G077120.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os03g13740 No alias immediate-early fungal elicitor protein CMPG1, putative,... 0.03 Orthogroups_2024-Update
LOC_Os06g13870 No alias U-box protein CMPG1, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00043995-RA No alias (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... 0.03 Orthogroups_2024-Update
PSME_00054803-RA No alias (at3g52450 : 283.0) Encodes a cytoplasmically localized... 0.05 Orthogroups_2024-Update
PSME_00056516-RA No alias (at3g19380 : 420.0) plant U-box 25 (PUB25); FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00056761-RA No alias (at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.002G070500 No alias plant U-box 29 0.05 Orthogroups_2024-Update
Potri.009G016100 No alias plant U-box 24 0.04 Orthogroups_2024-Update
Potri.017G135000 No alias ARM repeat superfamily protein 0.04 Orthogroups_2024-Update
Seita.7G094300.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.001G441100.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.003G367000.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G169200.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G169900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G102000.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc01g005160 No alias Avr9/Cf-9 rapidly elicited protein 1 0.06 Orthogroups_2024-Update
Solyc01g080920 No alias LOW QUALITY:U-box domain-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc04g008100 No alias U-box domain-containing protein (AHRD V3.3 *** A0A0A0RAL4_9ROSI) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003613 Ubox_domain 49 120
No external refs found!