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  5. Potri.005G198300

Potri.005G198300


Description : RH39


Gene families : OG_42_0007585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G198300
Cluster HCCA clusters: cluster_0036

Target Alias Description ECC score Gene Family Method Actions
86079 No alias RH39 0.02 Orthogroups_2024-Update
At4g09730 No alias RH39 [Source:UniProtKB/TrEMBL;Acc:A0A178V449] 0.03 Orthogroups_2024-Update
Bradi2g05390 No alias RH39 0.06 Orthogroups_2024-Update
Brara.C02616.1 No alias 23S-rRNA maturation helicase *(RH39) 0.03 Orthogroups_2024-Update
GRMZM2G175867 No alias RH39 0.04 Orthogroups_2024-Update
Glyma.02G078100 No alias RH39 0.04 Orthogroups_2024-Update
Kfl00088_0100 kfl00088_0100_v1.1 (at4g09730 : 387.0) Encodes RH39, a DEAD-box protein... 0.01 Orthogroups_2024-Update
LOC_Os01g08930 No alias DEAD-box ATP-dependent RNA helicase, putative, expressed 0.03 Orthogroups_2024-Update
Seita.5G131500.1 No alias 23S-rRNA maturation helicase *(RH39) 0.08 Orthogroups_2024-Update
Sobic.003G039300.1 No alias 23S-rRNA maturation helicase *(RH39) 0.06 Orthogroups_2024-Update
Solyc12g056740 No alias RNA helicase DEAD39 0.06 Orthogroups_2024-Update
Sopen12g029410 No alias DEAD/DEAH box helicase 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 144 327
IPR001650 Helicase_C 363 474
No external refs found!