Potri.005G199800

Description : Tetratricopeptide repeat (TPR)-like superfamily protein

Gene families : OG_42_0010081 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010081_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.005G199800
Cluster	HCCA clusters: cluster_0002

Target	Alias	Description	ECC score	Gene Family Method	Actions
GRMZM2G071986	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.03	Orthogroups_2024-Update
Sopen04g028340	No alias	PPR repeat family	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	444	568
IPR002885	Pentatricopeptide_repeat	338	369
IPR002885	Pentatricopeptide_repeat	170	216
IPR002885	Pentatricopeptide_repeat	271	318
IPR002885	Pentatricopeptide_repeat	244	268

External Links

No external refs found!