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  5. Sopen12g006700

Sopen12g006700


Description : Amino acid permease


Gene families : OG_42_0000938 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000938_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g006700
Cluster HCCA clusters: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G129600 No alias amino acid transporter 1 0.03 Orthogroups_2024-Update
HORVU3Hr1G028860.1 No alias cationic amino acid transporter *(CAT) 0.02 Orthogroups_2024-Update
HORVU5Hr1G093090.2 No alias cationic amino acid transporter *(CAT) 0.03 Orthogroups_2024-Update
MA_107084g0010 No alias (at4g21120 : 572.0) Encodes a member of the cationic... 0.03 Orthogroups_2024-Update
PSME_00024576-RA No alias (at4g21120 : 694.0) Encodes a member of the cationic... 0.02 Orthogroups_2024-Update
Seita.4G174400.1 No alias cationic amino acid transporter *(CAT) 0.03 Orthogroups_2024-Update
Solyc02g081850 No alias Cationic amino acid transporter (AHRD V3.3 *** G7INC3_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 107 509
IPR029485 CAT_C 545 594
No external refs found!