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  5. Potri.005G218600

Potri.005G218600


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0004898 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.005G218600
Cluster HCCA clusters: cluster_0009

Target Alias Description ECC score Gene Family Method Actions
At5g14050 No alias U3 small nucleolar RNA-associated protein 18 homolog... 0.04 Orthogroups_2024-Update
Bradi2g18710 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Orthogroups_2024-Update
Brara.J02043.1 No alias SSU processome assembly factor *(UTP18) 0.04 Orthogroups_2024-Update
Cre06.g255950 No alias Transducin/WD40 repeat-like superfamily protein 0.07 Orthogroups_2024-Update
Glyma.13G255400 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Orthogroups_2024-Update
Kfl00670_0030 kfl00670_0030_v1.1 (at5g14050 : 411.0) Transducin/WD40 repeat-like... 0.03 Orthogroups_2024-Update
LOC_Os07g41190 No alias WD domain, G-beta repeat domain containing protein, expressed 0.02 Orthogroups_2024-Update
Pp1s159_80V6 No alias wd repeat protein 0.06 Orthogroups_2024-Update
Seita.4G267000.1 No alias SSU processome assembly factor *(UTP18) 0.01 Orthogroups_2024-Update
Sobic.010G262800.1 No alias SSU processome assembly factor *(UTP18) 0.02 Orthogroups_2024-Update
Solyc10g080180 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
evm.model.contig_4456.10 No alias (at5g14050 : 251.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
evm.model.tig00020554.145 No alias (at5g14050 : 296.0) Transducin/WD40 repeat-like... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 407 441
No external refs found!