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  5. Sopen12g007020

Sopen12g007020


Description : Leucine Rich repeats (2 copies)


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g007020
Cluster HCCA clusters: Cluster_344

Target Alias Description ECC score Gene Family Method Actions
At1g47890 No alias Function unknown 0.02 Orthogroups_2024-Update
Brara.J00325.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G123963 No alias receptor like protein 27 0.02 Orthogroups_2024-Update
Glyma.14G173400 No alias receptor like protein 24 0.03 Orthogroups_2024-Update
HORVU7Hr1G006590.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g06720 No alias disease resistance protein SlVe2 precursor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.012G009200 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
Potri.T164100 No alias receptor like protein 12 0.02 Orthogroups_2024-Update
Sobic.007G033100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G141700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g009690 No alias BnaC05g27570D protein (AHRD V3.3 --* A0A078CAX2_BRANA) 0.03 Orthogroups_2024-Update
Solyc12g099950 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 9 61
IPR001611 Leu-rich_rpt 117 139
IPR001611 Leu-rich_rpt 771 828
IPR001611 Leu-rich_rpt 314 373
IPR001611 Leu-rich_rpt 479 540
No external refs found!