Potri.005G234700

Description : zinc knuckle (CCHC-type) family protein

Gene families : OG_42_0005846 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005846_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.005G234700
Cluster	HCCA clusters: cluster_0184

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi3g32520	No alias	zinc knuckle (CCHC-type) family protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025836	Zn_knuckle_CX2CX4HX4C	181	196
IPR001878	Znf_CCHC	237	253
IPR001878	Znf_CCHC	60	76
IPR001878	Znf_CCHC	217	231
IPR001878	Znf_CCHC	117	133
IPR001878	Znf_CCHC	98	114
IPR001878	Znf_CCHC	162	177
IPR001878	Znf_CCHC	79	94
IPR001878	Znf_CCHC	143	159

External Links

No external refs found!