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  5. Sopen12g007080

Sopen12g007080


Description : Leucine Rich repeats (2 copies)


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g007080
Cluster HCCA clusters: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G168795 No alias Leucine-rich repeat transmembrane protein kinase 0.02 Orthogroups_2024-Update
HORVU3Hr1G111090.1 No alias Unknown function 0.05 Orthogroups_2024-Update
LOC_Os04g40440 No alias expressed protein 0.03 Orthogroups_2024-Update
Potri.T113500 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
Potri.T160800 No alias receptor like protein 43 0.02 Orthogroups_2024-Update
Seita.6G164000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g008410 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.02 Orthogroups_2024-Update
Solyc01g016370 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Sopen00g010090 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update
Sopen03g006280 No alias Leucine rich repeat N-terminal domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 8 60
IPR001611 Leu-rich_rpt 518 575
IPR001611 Leu-rich_rpt 345 359
IPR001611 Leu-rich_rpt 89 102
IPR001611 Leu-rich_rpt 116 136
No external refs found!