Potri.005G241300

Description : DEA(D/H)-box RNA helicase family protein

Gene families : OG_42_0007352 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007352_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.005G241300
Cluster	HCCA clusters: cluster_0024

Target	Alias	Description	ECC score	Gene Family Method
107914	No alias	DEA(D/H)-box RNA helicase family protein	0.03	Orthogroups_2024-Update
Bradi4g07397	No alias	DEA(D/H)-box RNA helicase family protein	0.09	Orthogroups_2024-Update
Brara.H00871.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Cre10.g420900	No alias	DEA(D/H)-box RNA helicase family protein	0.07	Orthogroups_2024-Update
Glyma.08G313100	No alias	DEA(D/H)-box RNA helicase family protein	0.03	Orthogroups_2024-Update
Glyma.18G101600	No alias	DEA(D/H)-box RNA helicase family protein	0.05	Orthogroups_2024-Update
HORVU5Hr1G093160.3	No alias	Unknown function	0.03	Orthogroups_2024-Update
Kfl00083_0290	kfl00083_0290_v1.1	(at4g16630 : 610.0) DEA(D/H)-box RNA helicase family...	0.03	Orthogroups_2024-Update
LOC_Os12g29660	No alias	DEAD-box ATP-dependent RNA helicase, putative, expressed	0.02	Orthogroups_2024-Update
Pp1s29_19V6	No alias	FCAALL.424; DEAD/DEAH box helicase, putative (RH28)...	0.02	Orthogroups_2024-Update
Seita.3G322400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.002G262100.1	No alias	Unknown function	0.07	Orthogroups_2024-Update
Solyc04g081580	No alias	RNA helicase DEAD15	0.06	Orthogroups_2024-Update
Sopen04g035190	No alias	DEAD/DEAH box helicase	0.06	Orthogroups_2024-Update
evm.model.contig_601.5	No alias	(at4g16630 : 453.0) DEA(D/H)-box RNA helicase family...	0.03	Orthogroups_2024-Update
evm.model.tig00000792.35	No alias	(at4g16630 : 441.0) DEA(D/H)-box RNA helicase family...	0.08	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	160	329
IPR001650	Helicase_C	372	476

External Links

No external refs found!