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  5. Potri.006G005100

Potri.006G005100


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0007361 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007361_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G005100
Cluster HCCA clusters: cluster_0035

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G103250 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G064130.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Pp1s127_120V6 No alias pentatricopeptide repeat-containing 0.03 Orthogroups_2024-Update
Seita.7G074800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G087100.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Solyc07g005950 No alias Pentatricopeptide repeat-containing protein, putative... 0.03 Orthogroups_2024-Update
Sopen07g002080 No alias PPR repeat family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 386 436
IPR002885 Pentatricopeptide_repeat 295 317
IPR002885 Pentatricopeptide_repeat 122 148
IPR002885 Pentatricopeptide_repeat 539 568
IPR002885 Pentatricopeptide_repeat 17 46
IPR002885 Pentatricopeptide_repeat 331 357
IPR002885 Pentatricopeptide_repeat 86 114
IPR002885 Pentatricopeptide_repeat 152 198
IPR002885 Pentatricopeptide_repeat 471 516
IPR002885 Pentatricopeptide_repeat 575 616
IPR002885 Pentatricopeptide_repeat 641 688
No external refs found!