Potri.006G024100

Description : putative mitochondrial RNA helicase 2

Gene families : OG_42_0000844 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.006G024100
Cluster	HCCA clusters: cluster_0097

Target	Alias	Description	ECC score	Gene Family Method
Bradi4g35490	No alias	DEAD box RNA helicase (PRH75)	0.03	Orthogroups_2024-Update
Brara.A02729.1	No alias	group-II intron splicing RNA helicase *(PMH)	0.02	Orthogroups_2024-Update
Brara.E01722.1	No alias	group-II intron splicing RNA helicase *(PMH)	0.03	Orthogroups_2024-Update
Cre02.g118300	No alias	DEAD box RNA helicase (PRH75)	0.01	Orthogroups_2024-Update
Cre03.g200095	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Orthogroups_2024-Update
Cre17.g727700	No alias	DEAD box RNA helicase (RH3)	0.02	Orthogroups_2024-Update
GRMZM2G565140	No alias	putative mitochondrial RNA helicase 2	0.03	Orthogroups_2024-Update
HORVU5Hr1G011460.1	No alias	group-II intron splicing RNA helicase *(PMH)	0.06	Orthogroups_2024-Update
Pp1s163_96V6	No alias	dead box atp-dependent rna	0.02	Orthogroups_2024-Update
evm.model.contig_3385.6	No alias	(at5g26742 : 365.0) embryo defective 1138 (emb1138);...	0.02	Orthogroups_2024-Update
evm.model.contig_3450.5	No alias	(q41382\|rh7_spiol : 422.0) DEAD-box ATP-dependent RNA...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	128	297
IPR001650	Helicase_C	335	443

External Links

No external refs found!