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  5. Potri.006G052400

Potri.006G052400


Description : Ribosomal protein S5 family protein


Gene families : OG_42_0002117 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G052400
Cluster HCCA clusters: cluster_0028

Target Alias Description ECC score Gene Family Method Actions
67484 No alias Ribosomal protein S5 family protein 0.07 Orthogroups_2024-Update
A4A49_17312 No alias 40s ribosomal protein s2-4 0.06 Orthogroups_2024-Update
AC210013.4_FG019 No alias Ribosomal protein S5 family protein 0.1 Orthogroups_2024-Update
At1g58380 No alias At1g59359 [Source:UniProtKB/TrEMBL;Acc:G1JSI6] 0.05 Orthogroups_2024-Update
Bradi1g04660 No alias Ribosomal protein S5 family protein 0.05 Orthogroups_2024-Update
Bradi1g54270 No alias Ribosomal protein S5 family protein 0.05 Orthogroups_2024-Update
Brara.A02366.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Brara.C02137.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Brara.E00249.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
GRMZM2G092663 No alias Ribosomal protein S5 family protein 0.06 Orthogroups_2024-Update
Glyma.02G085300 No alias Ribosomal protein S5 family protein 0.11 Orthogroups_2024-Update
Glyma.05G239000 No alias Ribosomal protein S5 family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G086050.2 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
HORVU5Hr1G109910.2 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Mp5g04380.1 No alias component RPS2 of SSU proteome 0.03 Orthogroups_2024-Update
Mp5g05010.1 No alias component RPS2 of SSU proteome 0.03 Orthogroups_2024-Update
Mp5g15970.1 No alias component RPS2 of SSU proteome 0.04 Orthogroups_2024-Update
Pp1s10_190V6 No alias 40s ribosomal protein 0.07 Orthogroups_2024-Update
Pp1s274_5V6 No alias 40s ribosomal protein 0.05 Orthogroups_2024-Update
Pp1s400_15V6 No alias 40s ribosomal protein 0.07 Orthogroups_2024-Update
Seita.2G079700.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Seita.9G044700.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Sobic.001G046100.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.11 Orthogroups_2024-Update
Sobic.001G046300.1 No alias component *(uS5) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Solyc04g063290 No alias 40S ribosomal protein S2 (AHRD V3.3 *** K7WJZ4_SOLTU) 0.1 Orthogroups_2024-Update
Solyc04g074300 No alias 40S ribosomal protein S2 (AHRD V3.3 *** K7WJZ4_SOLTU) 0.08 Orthogroups_2024-Update
Sopen04g026210 No alias Ribosomal protein S5, N-terminal domain 0.08 Orthogroups_2024-Update
Sopen04g029430 No alias Ribosomal protein S5, N-terminal domain 0.07 Orthogroups_2024-Update
evm.model.contig_4442.1 No alias (at1g58684 : 326.0) Ribosomal protein S5 family protein;... 0.13 Orthogroups_2024-Update
evm.model.tig00020961.135 No alias (at3g57490 : 348.0) Ribosomal protein S5 family protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 84 148
IPR005324 Ribosomal_S5_C 167 233
No external refs found!