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  5. Potri.006G078000

Potri.006G078000


Description : RNA helicase, ATP-dependent, SK12/DOB1 protein


Gene families : OG_42_0001297 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G078000
Cluster HCCA clusters: cluster_0042

Target Alias Description ECC score Gene Family Method Actions
A4A49_05892 No alias dexh-box atp-dependent rna helicase dexh11 0.03 Orthogroups_2024-Update
Bradi3g04550 No alias RNA helicase, ATP-dependent, SK12/DOB1 protein 0.06 Orthogroups_2024-Update
Sobic.004G048800.1 No alias RNA helicase component *(SKI2) of SUPERKILLER regulation complex 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 88 234
IPR025696 rRNA_proc-arch_dom 538 796
IPR001650 Helicase_C 380 482
IPR012961 Ski2_C 824 994
No external refs found!