1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.006G099500

Potri.006G099500


Description : light harvesting complex photosystem II


Gene families : OG_42_0004123 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004123_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G099500
Cluster HCCA clusters: cluster_0035

Target Alias Description ECC score Gene Family Method Actions
At2g40100 No alias Chlorophyll a-b binding protein, chloroplastic... 0.03 Orthogroups_2024-Update
At3g08940 No alias Chlorophyll a-b binding protein CP29.2, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g24870 No alias light harvesting complex photosystem II 0.04 Orthogroups_2024-Update
Brara.B00018.1 No alias component *(LHCb4) of LHC-II complex 0.04 Orthogroups_2024-Update
Brara.E03123.1 No alias component *(LHCb4) of LHC-II complex 0.03 Orthogroups_2024-Update
Cre17.g720250 No alias light harvesting complex photosystem II 0.02 Orthogroups_2024-Update
Glyma.01G115900 No alias light harvesting complex photosystem II 0.06 Orthogroups_2024-Update
Glyma.03G060300 No alias light harvesting complex photosystem II 0.06 Orthogroups_2024-Update
HORVU2Hr1G041270.2 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G041280.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00258_0020 kfl00258_0020_v1.1 (at5g01530 : 324.0) light harvesting complex photosystem... 0.05 Orthogroups_2024-Update
LOC_Os07g37240 No alias chlorophyll A-B binding protein, putative, expressed 0.04 Orthogroups_2024-Update
Mp1g16850.1 No alias component LHCb4 of LHC-II complex 0.03 Orthogroups_2024-Update
PSME_00005803-RA No alias (at3g08940 : 324.0) Lhcb4.2 protein (Lhcb4.2, protein... 0.03 Orthogroups_2024-Update
Pp1s472_15V6 No alias chlorophyll a b binding 0.03 Orthogroups_2024-Update
Seita.2G351600.1 No alias component *(LHCb4) of LHC-II complex 0.03 Orthogroups_2024-Update
Sobic.002G338000.1 No alias component *(LHCb4) of LHC-II complex 0.02 Orthogroups_2024-Update
Solyc09g014520 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.03 Orthogroups_2024-Update
Sopen09g007360 No alias Chlorophyll A-B binding protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 60 256
No external refs found!