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  5. Potri.006G117700

Potri.006G117700


Description : homeobox 51


Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G117700
Cluster HCCA clusters: cluster_0173

Target Alias Description ECC score Gene Family Method Actions
Brara.B01411.1 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Brara.C00651.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I03165.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G058900 No alias homeobox protein 40 0.04 Orthogroups_2024-Update
Glyma.17G096700 No alias homeobox 1 0.03 Orthogroups_2024-Update
HORVU2Hr1G092710.2 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G072810.6 No alias HD-ZIP I/II-type transcription factor 0.02 Orthogroups_2024-Update
Mp3g02320.1 No alias transcription factor (HD-ZIP I/II) 0.02 Orthogroups_2024-Update
PSME_00017541-RA No alias (at2g22430 : 139.0) Encodes a homeodomain leucine zipper... 0.02 Orthogroups_2024-Update
PSME_00033843-RA No alias (at3g01470 : 181.0) Encodes a homeodomain leucine zipper... 0.03 Orthogroups_2024-Update
Potri.012G070900 No alias homeobox 1 0.03 Orthogroups_2024-Update
Seita.1G306100.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Seita.6G145000.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Seita.6G187700.1 No alias HD-ZIP I/II-type transcription factor 0.03 Orthogroups_2024-Update
Solyc03g113270 No alias LEVAHOX1G L.esculentum homeobox 0.03 Orthogroups_2024-Update
Solyc05g006980 No alias Homeobox leucine zipper family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g040080 No alias Homeobox domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 71 124
IPR003106 Leu_zip_homeo 126 159
No external refs found!