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  5. Potri.006G118600

Potri.006G118600


Description : Argonaute family protein


Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G118600
Cluster HCCA clusters: cluster_0143

Target Alias Description ECC score Gene Family Method Actions
Brara.B00933.1 No alias siRNA-integrating factor *(AGO) 0.02 Orthogroups_2024-Update
Brara.J01515.1 No alias siRNA-integrating factor *(AGO) 0.03 Orthogroups_2024-Update
GRMZM2G450474 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 Orthogroups_2024-Update
Kfl00085_0250 kfl00085_0250_v1.... (at1g48410 : 963.0) Encodes an RNA Slicer that... 0.01 Orthogroups_2024-Update
LOC_Os01g16870 No alias argonaute, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g39640 No alias PINHEAD, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00014451-RA No alias (at1g69440 : 623.0) Encodes ARGONAUTE7, a member of the... 0.02 Orthogroups_2024-Update
Sobic.001G053700.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G136150.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G003700.1 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 Orthogroups_2024-Update
evm.model.contig_2082.8 No alias (at1g48410 : 352.0) Encodes an RNA Slicer that... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032472 ArgoL2 437 483
IPR014811 ArgoL1 245 294
IPR003165 Piwi 582 885
IPR032473 Argonaute_Mid_dom 494 570
IPR003100 PAZ_dom 315 427
IPR032474 Argonaute_N 102 234
No external refs found!