1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.006G120100

Potri.006G120100


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G120100
Cluster HCCA clusters: cluster_0160

Target Alias Description ECC score Gene Family Method Actions
At1g11590 No alias Probable pectinesterase/pectinesterase inhibitor 19... 0.03 Orthogroups_2024-Update
At3g17060 No alias Probable pectinesterase 67... 0.04 Orthogroups_2024-Update
At5g19730 No alias Probable pectinesterase 53... 0.04 Orthogroups_2024-Update
Brara.I00335.1 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Glyma.01G068100 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G125100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G060900 No alias pectin methylesterase 31 0.03 Orthogroups_2024-Update
MA_6149868g0010 No alias (at2g36710 : 275.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Mp3g01170.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 102 391
No external refs found!