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Description : transducin family protein / WD-40 repeat family protein
Gene families : OG_42_0005593 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005593_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Populus release: Potri.006G121100 | |
| Cluster | HCCA clusters: cluster_0027 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AC209858.4_FG002 | No alias | transducin family protein / WD-40 repeat family protein | 0.06 | Orthogroups_2024-Update | |
| At3g21540 | No alias | Transducin family protein / WD-40 repeat family protein... | 0.05 | Orthogroups_2024-Update | |
| Bradi1g74940 | No alias | transducin family protein / WD-40 repeat family protein | 0.02 | Orthogroups_2024-Update | |
| Brara.A01985.1 | No alias | SSU processome assembly factor *(UTP12) | 0.06 | Orthogroups_2024-Update | |
| Cre10.g438700 | No alias | transducin family protein / WD-40 repeat family protein | 0.06 | Orthogroups_2024-Update | |
| Glyma.03G186500 | No alias | transducin family protein / WD-40 repeat family protein | 0.08 | Orthogroups_2024-Update | |
| HORVU4Hr1G083410.1 | No alias | SSU processome assembly factor *(UTP12) | 0.07 | Orthogroups_2024-Update | |
| Kfl00065_0230 | kfl00065_0230_v1.1 | (at3g21540 : 612.0) transducin family protein / WD-40... | 0.02 | Orthogroups_2024-Update | |
| Mp2g05570.1 | No alias | SSU processome assembly factor (UTP12) | 0.02 | Orthogroups_2024-Update | |
| PSME_00009688-RA | No alias | (at3g21540 : 120.0) transducin family protein / WD-40... | 0.05 | Orthogroups_2024-Update | |
| Seita.9G537800.1 | No alias | SSU processome assembly factor *(UTP12) | 0.1 | Orthogroups_2024-Update | |
| Sobic.001G501400.1 | No alias | SSU processome assembly factor *(UTP12) | 0.05 | Orthogroups_2024-Update | |
| Solyc10g039190 | No alias | transducin family protein / WD-40 repeat family protein... | 0.1 | Orthogroups_2024-Update | |
| Sopen10g012250 | No alias | WD domain, G-beta repeat | 0.06 | Orthogroups_2024-Update | |
| evm.model.contig_4446.12 | No alias | (at3g21540 : 426.0) transducin family protein / WD-40... | 0.07 | Orthogroups_2024-Update | |
| evm.model.tig00021721.26 | No alias | (at3g21540 : 312.0) transducin family protein / WD-40... | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001680 | WD40_repeat | 662 | 699 |
| IPR001680 | WD40_repeat | 482 | 519 |
| IPR001680 | WD40_repeat | 100 | 138 |
| IPR001680 | WD40_repeat | 581 | 614 |
| IPR001680 | WD40_repeat | 65 | 96 |
| IPR001680 | WD40_repeat | 406 | 438 |
| IPR001680 | WD40_repeat | 185 | 221 |
| IPR001680 | WD40_repeat | 146 | 180 |
| IPR007148 | SSU_processome_Utp12 | 802 | 902 |
| No external refs found! |