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  5. Potri.006G122000

Potri.006G122000


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G122000
Cluster HCCA clusters: cluster_0166

Target Alias Description ECC score Gene Family Method Actions
A4A49_12542 No alias pectate lyase 0.02 Orthogroups_2024-Update
A4A49_23917 No alias putative pectate lyase 13 0.03 Orthogroups_2024-Update
A4A49_24630 No alias putative pectate lyase 3 0.04 Orthogroups_2024-Update
A4A49_35755 No alias putative pectate lyase p59 0.04 Orthogroups_2024-Update
At2g02720 No alias Probable pectate lyase 6 [Source:UniProtKB/Swiss-Prot;Acc:O64510] 0.03 Orthogroups_2024-Update
At5g15110 No alias Pectate lyase family protein [Source:TAIR;Acc:AT5G15110] 0.03 Orthogroups_2024-Update
Brara.B00588.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.B01305.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.D00702.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.06 Orthogroups_2024-Update
Mp8g00770.1 No alias pectate lyase 0.02 Orthogroups_2024-Update
PSME_00000524-RA No alias (at4g24780 : 590.0) Pectin lyase-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00017512-RA No alias (at4g24780 : 545.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00020782-RA No alias (at5g63180 : 492.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
PSME_00041064-RA No alias (at1g67750 : 595.0) Pectate lyase family protein;... 0.05 Orthogroups_2024-Update
Potri.015G064700 No alias Pectate lyase family protein 0.03 Orthogroups_2024-Update
Pp1s173_162V6 No alias pectate lyase 0.03 Orthogroups_2024-Update
Pp1s409_2V6 No alias pectate lyase 0.03 Orthogroups_2024-Update
Seita.9G233400.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Solyc02g080910 No alias Pectate lyase (AHRD V3.3 *** K4B9W1_SOLLC) 0.02 Orthogroups_2024-Update
Solyc06g071840 No alias Pectate lyase (AHRD V3.3 *-* M1CKT3_SOLTU) 0.02 Orthogroups_2024-Update
Sopen02g016600 No alias Pectate lyase 0.02 Orthogroups_2024-Update
Sopen02g025600 No alias Pectate lyase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002022 Pec_lyase 155 334
No external refs found!