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  5. Potri.006G134800

Potri.006G134800


Description : pectin methylesterase 1


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G134800
Cluster HCCA clusters: cluster_0148

Target Alias Description ECC score Gene Family Method Actions
165098 No alias Pectin lyase-like superfamily protein 0.01 Orthogroups_2024-Update
Mp1g00190.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00020051-RA No alias (at5g19730 : 262.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Seita.3G333900.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Seita.5G027700.1 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
Seita.9G259700.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc12g008530 No alias Pectinesterase (AHRD V3.3 *** K4DBU1_SOLLC) 0.03 Orthogroups_2024-Update
Sopen07g033560 No alias Pectinesterase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 72 238
IPR000070 Pectinesterase_cat 289 581
No external refs found!