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  5. Potri.006G139500

Potri.006G139500


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Populus release: Potri.006G139500
Cluster HCCA clusters: cluster_0051

Target Alias Description ECC score Gene Family Method Actions
At4g23820 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
Glyma.03G216800 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G256100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os09g26800 No alias polygalacturonase, putative, expressed 0.02 Orthogroups_2024-Update
Solyc01g094970 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G61490.4) 0.03 Orthogroups_2024-Update
Solyc08g082170 No alias Pectin lyase-like superfamily protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc09g075460 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT3G16850.1) 0.03 Orthogroups_2024-Update
Sopen08g030460 No alias Glycosyl hydrolases family 28 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 173 455
No external refs found!