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  5. Potri.006G139600

Potri.006G139600


Description : photosystem I light harvesting complex gene 6


Gene families : OG_42_0000070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G139600
Cluster HCCA clusters: cluster_0030

Target Alias Description ECC score Gene Family Method Actions
At1g45474 No alias Photosystem I chlorophyll a/b-binding protein 5,... 0.03 Orthogroups_2024-Update
Bradi3g58020 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
Bradi4g31257 No alias photosystem I light harvesting complex gene 6 0.05 Orthogroups_2024-Update
Cre06.g272650 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
Cre06.g278213 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
Cre06.g283050 No alias photosystem I light harvesting complex gene 1 0.03 Orthogroups_2024-Update
Cre06.g285250 No alias photosystem II light harvesting complex gene 2.1 0.02 Orthogroups_2024-Update
Cre07.g344950 No alias photosystem I light harvesting complex gene 5 0.02 Orthogroups_2024-Update
Cre10.g425900 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.03 Orthogroups_2024-Update
Cre10.g452050 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
Cre12.g508750 No alias photosystem I light harvesting complex gene 6 0.02 Orthogroups_2024-Update
Cre16.g673650 No alias light harvesting complex of photosystem II 5 0.02 Orthogroups_2024-Update
Cre16.g687900 No alias photosystem I light harvesting complex gene 5 0.03 Orthogroups_2024-Update
GRMZM2G131489 No alias Chlorophyll A-B binding family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G062240.1 No alias linker protein *(LHCa6) between PS-I complex and NDH complex 0.07 Orthogroups_2024-Update
Kfl00023_0070 kfl00023_0070_v1.1 (at3g47470 : 285.0) Encodes a chlorophyll a/b-binding... 0.02 Orthogroups_2024-Update
Kfl00098_0080 kfl00098_0080_v1.1 (p27495|cb24_tobac : 391.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
Kfl00098_0090 kfl00098_0090_v1.1 (p27495|cb24_tobac : 389.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
Kfl00100_0170 kfl00100_0170_v1.1 (at3g54890 : 240.0) Encodes a component of the light... 0.05 Orthogroups_2024-Update
Kfl00104_0350 kfl00104_0350_v1.1 (at4g10340 : 325.0) photosystem II encoding the... 0.02 Orthogroups_2024-Update
Kfl00120_0160 kfl00120_0160_v1.1 (p12470|cb25_nicpl : 340.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
Kfl00422_0020 kfl00422_0020_v1.1 (p27523|cb23_horvu : 184.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
Kfl00564_0030 kfl00564_0030_v1.1 (p13869|cb12_pethy : 291.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
Kfl01434_0010 kfl01434_0010_v1.1 (p27493|cb22_tobac : 410.0) Chlorophyll a-b binding... 0.01 Orthogroups_2024-Update
MA_10431300g0020 No alias (p10049|cb21_pinth : 457.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
MA_10431493g0010 No alias (at3g54890 : 355.0) Encodes a component of the light... 0.05 Orthogroups_2024-Update
MA_131587g0010 No alias (p15194|cb2b_pinsy : 453.0) Chlorophyll a-b binding... 0.04 Orthogroups_2024-Update
MA_176279g0010 No alias (at4g10340 : 387.0) photosystem II encoding the... 0.09 Orthogroups_2024-Update
MA_267089g0010 No alias (p10049|cb21_pinth : 242.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
MA_65346g0010 No alias (at3g47470 : 317.0) Encodes a chlorophyll a/b-binding... 0.04 Orthogroups_2024-Update
MA_97315g0010 No alias (p15193|cb2a_pinsy : 556.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
Mp1g29620.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp3g07840.1 No alias component LHCa4 of LHC-I complex 0.02 Orthogroups_2024-Update
Mp7g05530.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
Mp7g05880.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
Mp7g05890.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Orthogroups_2024-Update
Mp7g06720.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g06740.1 No alias component LHCb1/2/3 of LHC-II complex 0.01 Orthogroups_2024-Update
Mp7g06750.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g06770.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
PSME_00020247-RA No alias (at3g47470 : 395.0) Encodes a chlorophyll a/b-binding... 0.03 Orthogroups_2024-Update
PSME_00044304-RA No alias (p13869|cb12_pethy : 391.0) Chlorophyll a-b binding... 0.05 Orthogroups_2024-Update
PSME_00045363-RA No alias (at3g54890 : 352.0) Encodes a component of the light... 0.02 Orthogroups_2024-Update
PSME_00054524-RA No alias (p10049|cb21_pinth : 468.0) Chlorophyll a-b binding... 0.04 Orthogroups_2024-Update
PSME_00056454-RA No alias (p15194|cb2b_pinsy : 543.0) Chlorophyll a-b binding... 0.03 Orthogroups_2024-Update
Pp1s1_625V6 No alias chlorophyll a b binding 0.02 Orthogroups_2024-Update
Pp1s52_157V6 No alias light-harvesting complex ii protein lhcb2 0.02 Orthogroups_2024-Update
Pp1s628_7V6 No alias light-harvesting complex ii protein lhcb5 0.06 Orthogroups_2024-Update
Pp1s651_2V6 No alias chlorophyll a-b binding protein 0.04 Orthogroups_2024-Update
Seita.2G217800.1 No alias linker protein *(LHCa6) between PS-I complex and NDH complex 0.12 Orthogroups_2024-Update
Seita.4G139900.1 No alias component *(LHCa1) of LHC-I complex 0.03 Orthogroups_2024-Update
Sobic.002G215000.2 No alias linker protein *(LHCa6) between PS-I complex and NDH complex 0.07 Orthogroups_2024-Update
Sobic.003G209800.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Sobic.004G308700.1 No alias linker protein *(LHCa5) between PS-I complex and NDH complex 0.04 Orthogroups_2024-Update
Solyc04g082920 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.03 Orthogroups_2024-Update
Sopen12g004150 No alias Chlorophyll A-B binding protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 65 231
No external refs found!