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  5. Potri.006G149000

Potri.006G149000


Description : CRS1 / YhbY (CRM) domain-containing protein


Gene families : OG_42_0000921 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000921_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G149000
Cluster HCCA clusters: cluster_0036

Target Alias Description ECC score Gene Family Method Actions
120007 No alias CRS1 / YhbY (CRM) domain-containing protein 0.02 Orthogroups_2024-Update
20706 No alias CRS1 / YhbY (CRM) domain-containing protein 0.03 Orthogroups_2024-Update
412905 No alias CRS1 / YhbY (CRM) domain-containing protein 0.02 Orthogroups_2024-Update
Bradi2g17390 No alias CRS1 / YhbY (CRM) domain-containing protein 0.06 Orthogroups_2024-Update
Bradi3g21852 No alias ortholog of maize chloroplast splicing factor CRS1 0.02 Orthogroups_2024-Update
Bradi4g14900 No alias CRM family member 3A 0.07 Orthogroups_2024-Update
Bradi4g28800 No alias CRS1 / YhbY (CRM) domain-containing protein 0.05 Orthogroups_2024-Update
Bradi5g12660 No alias CRM family member 2 0.02 Orthogroups_2024-Update
Brara.K01693.1 No alias plastidial RNA splicing factor *(CFM3) 0.05 Orthogroups_2024-Update
GRMZM2G094072 No alias CRM family member 2 0.02 Orthogroups_2024-Update
GRMZM5G813259 No alias CRS1 / YhbY (CRM) domain-containing protein 0.04 Orthogroups_2024-Update
Glyma.19G014000 No alias CRM family member 2 0.04 Orthogroups_2024-Update
HORVU1Hr1G083550.4 No alias Unknown function 0.06 Orthogroups_2024-Update
LOC_Os05g47850 No alias chloroplastic group IIA intron splicing facilitator... 0.02 Orthogroups_2024-Update
MA_10432072g0010 No alias (at3g23070 : 659.0) Encodes a CRM domain protein CFM3a,... 0.04 Orthogroups_2024-Update
Pp1s70_29V6 No alias crm family member 3 0.03 Orthogroups_2024-Update
Seita.2G185900.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Seita.3G156100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.7G127900.1 No alias plastidial RNA splicing factor *(CFM2) 0.07 Orthogroups_2024-Update
Seita.8G170300.1 No alias plastidial RNA splicing factor *(CFM3) 0.04 Orthogroups_2024-Update
Sobic.002G181000.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.005G169600.1 No alias plastidial RNA splicing factor *(CFM3) 0.04 Orthogroups_2024-Update
Sobic.006G110200.2 No alias plastidial RNA splicing factor *(CFM2) 0.05 Orthogroups_2024-Update
Sobic.007G107700.1 No alias plastidial RNA splicing factor *(CRS1) 0.02 Orthogroups_2024-Update
Sobic.009G223200.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Solyc02g087250 No alias Chloroplastic group IIA intron splicing facilitator... 0.08 Orthogroups_2024-Update
Sopen02g030880 No alias CRS1 / YhbY (CRM) domain 0.02 Orthogroups_2024-Update
Sopen02g031990 No alias CRS1 / YhbY (CRM) domain 0.08 Orthogroups_2024-Update
Sopen03g038300 No alias CRS1 / YhbY (CRM) domain 0.08 Orthogroups_2024-Update
Sopen07g019080 No alias CRS1 / YhbY (CRM) domain 0.08 Orthogroups_2024-Update
Sopen09g032270 No alias CRS1 / YhbY (CRM) domain 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 567 651
IPR001890 RNA-binding_CRM 364 447
IPR001890 RNA-binding_CRM 781 867
No external refs found!