Potri.006G156200

Description : RNA-binding CRS1 / YhbY (CRM) domain-containing protein

Gene families : OG_42_0001286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001286_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.006G156200
Cluster	HCCA clusters: cluster_0036

Target	Alias	Description	ECC score	Gene Family Method
62891	No alias	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	0.04	Orthogroups_2024-Update
A4A49_15851	No alias	crs2-associated factor 1, mitochondrial	0.02	Orthogroups_2024-Update
A4A49_40796	No alias	crs2-associated factor 1, chloroplastic	0.03	Orthogroups_2024-Update
Bradi2g12140	No alias	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	0.03	Orthogroups_2024-Update
Bradi2g13640	No alias	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	0.03	Orthogroups_2024-Update
Brara.G00072.1	No alias	component *(CAF) of CRS2-CAF plastidial RNA splicing...	0.03	Orthogroups_2024-Update
LOC_Os01g21990	No alias	CRS2-associated factor 2, chloroplast precursor,...	0.03	Orthogroups_2024-Update
Seita.5G154500.1	No alias	component *(CAF) of CRS2-CAF plastidial RNA splicing...	0.03	Orthogroups_2024-Update
Seita.9G384400.1	No alias	component *(CAF) of CRS2-CAF plastidial RNA splicing...	0.06	Orthogroups_2024-Update
Sobic.003G151500.1	No alias	component *(CAF) of CRS2-CAF plastidial RNA splicing...	0.05	Orthogroups_2024-Update
Sobic.007G185700.1	No alias	component *(CAF) of CRS2-CAF plastidial RNA splicing...	0.07	Orthogroups_2024-Update
Solyc05g018240	No alias	GSVIVT00005628001, HT7 (AHRD V3.3 *** A0A0A9GN13_ARUDO)	0.03	Orthogroups_2024-Update
Sopen05g015000	No alias	CRS1 / YhbY (CRM) domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001890	RNA-binding_CRM	248	331
IPR001890	RNA-binding_CRM	367	449

External Links

No external refs found!