1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.006G166000

Potri.006G166000


Description : lysyl-tRNA synthetase 1


Gene families : OG_42_0002438 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002438_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G166000
Cluster HCCA clusters: cluster_0083

Target Alias Description ECC score Gene Family Method Actions
Brara.A03391.1 No alias EC_6.1 ligase forming carbon-oxygen bond & lysine-tRNA ligase 0.02 Orthogroups_2024-Update
Kfl00061_0030 kfl00061_0030_v1.1 (q6f2u9|syk_orysa : 700.0) Lysyl-tRNA synthetase (EC... 0.02 Orthogroups_2024-Update
Seita.9G178100.1 No alias EC_6.1 ligase forming carbon-oxygen bond & lysine-tRNA ligase 0.02 Orthogroups_2024-Update
Sobic.001G178400.1 No alias EC_6.1 ligase forming carbon-oxygen bond & lysine-tRNA ligase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 113 192
IPR004364 aa-tRNA-synt_II 235 584
No external refs found!