Potri.006G193700

Description : homeobox from Arabidopsis thaliana

Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.006G193700
Cluster	HCCA clusters: cluster_0054

Target	Alias	Description	ECC score	Gene Family Method
A4A49_15898	No alias	homeobox-leucine zipper protein hat4	0.03	Orthogroups_2024-Update
Bradi5g17570	No alias	homeobox-leucine zipper protein 3	0.02	Orthogroups_2024-Update
Brara.B01941.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM5G830671	No alias	homeobox protein 2	0.02	Orthogroups_2024-Update
Glyma.17G056300	No alias	homeobox from Arabidopsis thaliana	0.04	Orthogroups_2024-Update
HORVU4Hr1G065900.5	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
MA_10434389g0010	No alias	(at5g06710 : 187.0) Homeobox-leucine zipper protein.;...	0.02	Orthogroups_2024-Update
MA_60457g0010	No alias	(at5g06710 : 208.0) Homeobox-leucine zipper protein.;...	0.04	Orthogroups_2024-Update
Mp2g24200.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Orthogroups_2024-Update
PSME_00008883-RA	No alias	(at2g22800 : 108.0) Encodes homeobox protein HAT9.;...	0.02	Orthogroups_2024-Update
PSME_00022003-RA	No alias	(at4g37790 : 231.0) Encodes homeobox protein HAT22,...	0.02	Orthogroups_2024-Update
PSME_00028375-RA	No alias	(at5g06710 : 210.0) Homeobox-leucine zipper protein.;...	0.03	Orthogroups_2024-Update
PSME_00037622-RA	No alias	(at5g47370 : 151.0) homeobox-leucine zipper genes...	0.01	Orthogroups_2024-Update
Seita.9G301000.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Solyc07g054380	No alias	Homeobox-leucine zipper protein family (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Sopen06g020980	No alias	HD-ZIP protein N terminus	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	171	225
IPR006712	HD-ZIP_N	47	137
IPR003106	Leu_zip_homeo	227	261

External Links

No external refs found!

Potri.006G193700

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation