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  5. Sopen12g009320

Sopen12g009320


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0003223 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003223_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen12g009320
Cluster HCCA clusters: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Sopen03g005010 No alias gag-polypeptide of LTR copia-type 0.02 Orthogroups_2024-Update
Sopen07g005330 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 1072 1312
IPR004332 Transposase_MuDR 152 210
IPR029472 Copia-like_N 593 623
IPR018289 MULE_transposase_dom 345 415
No external refs found!