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  5. Potri.006G200800

Potri.006G200800


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0009808 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G200800
Cluster HCCA clusters: cluster_0002

Target Alias Description ECC score Gene Family Method Actions
Sobic.004G256900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc01g006850 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen01g002840 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 415 456
IPR002885 Pentatricopeptide_repeat 733 777
IPR002885 Pentatricopeptide_repeat 482 530
IPR002885 Pentatricopeptide_repeat 238 286
IPR002885 Pentatricopeptide_repeat 905 953
IPR002885 Pentatricopeptide_repeat 979 1022
IPR002885 Pentatricopeptide_repeat 780 798
IPR002885 Pentatricopeptide_repeat 876 903
IPR002885 Pentatricopeptide_repeat 349 373
IPR002885 Pentatricopeptide_repeat 384 409
IPR002885 Pentatricopeptide_repeat 698 727
IPR002885 Pentatricopeptide_repeat 839 862
No external refs found!