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  5. Potri.006G202600

Potri.006G202600


Description : plant U-box 22


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G202600
Cluster HCCA clusters: cluster_0166

Target Alias Description ECC score Gene Family Method Actions
At1g49780 No alias U-box domain-containing protein 26... 0.03 Orthogroups_2024-Update
Bradi1g68530 No alias ARM repeat superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G189600 No alias CYS, MET, PRO, and GLY protein 2 0.03 Orthogroups_2024-Update
Glyma.06G154100 No alias plant U-box 22 0.02 Orthogroups_2024-Update
HORVU4Hr1G064070.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G077120.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU6Hr1G089560.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Kfl00376_0010 kfl00376_0010_v1.... (at2g28830 : 87.8) PLANT U-BOX 12 (PUB12); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00054803-RA No alias (at3g52450 : 283.0) Encodes a cytoplasmically localized... 0.03 Orthogroups_2024-Update
PSME_00056652-RA No alias (at2g35930 : 195.0) Encodes a cytoplasmically localized... 0.03 Orthogroups_2024-Update
PSME_00056761-RA No alias (at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.009G016200 No alias plant U-box 23 0.03 Orthogroups_2024-Update
Potri.017G135000 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Pp1s198_49V6 No alias F14J22.1; U-box domain-containing protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.1G186200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.4G109000.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G169200.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G169900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g008100 No alias U-box domain-containing protein (AHRD V3.3 *** A0A0A0RAL4_9ROSI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003613 Ubox_domain 6 75
No external refs found!