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  5. Potri.006G215200

Potri.006G215200


Description : RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain


Gene families : OG_42_0002115 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002115_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Populus release: Potri.006G215200
Cluster HCCA clusters: cluster_0189

Target Alias Description ECC score Gene Family Method Actions
A4A49_36741 No alias serinearginine-rich splicing factor rs2z33 0.04 Orthogroups_2024-Update
Brara.C01874.1 No alias RNA splicing factor *(RSZ32/33) 0.04 Orthogroups_2024-Update
GRMZM2G099186 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 Orthogroups_2024-Update
Glyma.03G175400 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.03 Orthogroups_2024-Update
Glyma.19G176100 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.04 Orthogroups_2024-Update
LOC_Os03g17710 No alias splicing factor, arginine/serine-rich, putative, expressed 0.02 Orthogroups_2024-Update
Seita.5G110500.1 No alias RNA splicing factor *(RSZ32/33) 0.03 Orthogroups_2024-Update
Solyc10g047610 No alias Arginine/serine-rich splicing factor, putative (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 13 74
IPR001878 Znf_CCHC 100 115
IPR001878 Znf_CCHC 121 138
No external refs found!