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  5. Potri.006G218500

Potri.006G218500


Description : Rhamnogalacturonate lyase family protein


Gene families : OG_42_0000589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G218500
Cluster HCCA clusters: cluster_0085

Target Alias Description ECC score Gene Family Method Actions
A4A49_01931 No alias hypothetical protein 0.04 Orthogroups_2024-Update
A4A49_40794 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Glyma.04G091066 No alias Rhamnogalacturonate lyase family protein 0.03 Orthogroups_2024-Update
Potri.002G110300 No alias Rhamnogalacturonate lyase family protein 0.03 Orthogroups_2024-Update
Solyc11g011280 No alias Rhamnogalacturonate lyase family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen11g006070 No alias Rhamnogalacturonate lyase family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010325 Rhamnogal_lyase 44 244
IPR029413 RG-lyase_II 398 469
IPR029411 RG-lyase_III 484 671
No external refs found!