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  5. Potri.006G241800

Potri.006G241800


Description : La protein 1


Gene families : OG_42_0002790 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002790_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.006G241800
Cluster HCCA clusters: cluster_0009

Target Alias Description ECC score Gene Family Method Actions
Bradi5g14590 No alias La protein 1 0.06 Orthogroups_2024-Update
Brara.A00518.1 No alias nascent RNA chaperone *(LA) 0.05 Orthogroups_2024-Update
Cre17.g724200 No alias RNA recognition motif (RRM)-containing protein 0.03 Orthogroups_2024-Update
GRMZM2G096705 No alias La protein 1 0.02 Orthogroups_2024-Update
Glyma.06G082200 No alias La protein 1 0.04 Orthogroups_2024-Update
Glyma.17G190500 No alias La protein 1 0.08 Orthogroups_2024-Update
HORVU2Hr1G085880.1 No alias nascent RNA chaperone *(LA) 0.06 Orthogroups_2024-Update
Kfl00003_0530 kfl00003_0530_v1.1 (at4g32720 : 156.0) Encodes AtLa1, a member of the... 0.04 Orthogroups_2024-Update
Seita.1G228700.1 No alias nascent RNA chaperone *(LA) 0.04 Orthogroups_2024-Update
Seita.7G153300.1 No alias nascent RNA chaperone *(LA) 0.07 Orthogroups_2024-Update
Sobic.006G135000.1 No alias nascent RNA chaperone *(LA) 0.1 Orthogroups_2024-Update
Solyc08g068310 No alias La-like protein (AHRD V3.3 *** W9RMR2_9ROSA) 0.06 Orthogroups_2024-Update
Sopen08g022160 No alias RNA binding motif 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 120 177
IPR006630 La_HTH 14 84
IPR014886 La_RRM 339 432
No external refs found!